JEM-EUSO (Extreme Universe Space Observatory on Japanese Experiment Module) is an advanced observatory that will be on-board the International Space Station (ISS) and use the Earth׳s atmosphere as a huge calorimeter detector. However, the atmospheric clouds introduce uncertainties in the signals measured by JEM-EUSO. Therefore, it is extremely important to know the atmospheric conditions and properties of the clouds in the Field of View (FoV) of the telescope. The Atmospheric Monitoring System (AMS) of JEM-EUSO includes a lidar and an infrared imaging system, IR-Camera, aimed to detect the presence of clouds and to obtain the cloud coverage and cloud top altitude during the observations of the JEM-EUSO main telescope. To define the road-map for the design of the electronics, the detector has been tested extensively with a first prototype. The actual design of the IR-Camera, the test of the prototype, and the outcome of this characterization are presented in this paper.